diff --git a/src/Microsoft.AspNetCore.Server.IISIntegration.Tools/WebConfigTransform.cs b/src/Microsoft.AspNetCore.Server.IISIntegration.Tools/WebConfigTransform.cs
index d5cfc66af2..66e0b60f5d 100644
--- a/src/Microsoft.AspNetCore.Server.IISIntegration.Tools/WebConfigTransform.cs
+++ b/src/Microsoft.AspNetCore.Server.IISIntegration.Tools/WebConfigTransform.cs
@@ -59,7 +59,7 @@ namespace Microsoft.AspNetCore.Server.IISIntegration.Tools
         {
             // Forward slashes currently work neither in AspNetCoreModule nor in dotnet so they need to be
             // replaced with backwards slashes when the application is published on a non-Windows machine
-            var appPath = Path.Combine(configureForAzure ? @"%home%\site" : ".", appName).Replace("/", "\\");
+            var appPath = Path.Combine(".", appName).Replace("/", "\\");
             var logPath = Path.Combine(configureForAzure ? @"\\?\%home%\LogFiles" : @".\logs", "stdout").Replace("/", "\\");
 
             if (!isPortable)
@@ -83,7 +83,6 @@ namespace Microsoft.AspNetCore.Server.IISIntegration.Tools
 
             SetAttributeValueIfEmpty(aspNetCoreElement, "stdoutLogEnabled", "false");
             SetAttributeValueIfEmpty(aspNetCoreElement, "stdoutLogFile", logPath);
-            SetAttributeValueIfEmpty(aspNetCoreElement, "startupTimeLimit", "3600");
         }
 
         private static XElement GetOrCreateChild(XElement parent, string childName)
diff --git a/test/Microsoft.AspNetCore.Server.IISIntegration.Tools.Tests/WebConfigTransformFacts.cs b/test/Microsoft.AspNetCore.Server.IISIntegration.Tools.Tests/WebConfigTransformFacts.cs
index 51720967b2..4ebfef6c34 100644
--- a/test/Microsoft.AspNetCore.Server.IISIntegration.Tools.Tests/WebConfigTransformFacts.cs
+++ b/test/Microsoft.AspNetCore.Server.IISIntegration.Tools.Tests/WebConfigTransformFacts.cs
@@ -12,7 +12,7 @@ namespace Microsoft.AspNetCore.Server.IISIntegration.Tools.Tests
     <handlers>
       <add name=""aspNetCore"" path=""*"" verb=""*"" modules=""AspNetCoreModule"" resourceType=""Unspecified""/>
     </handlers>
-    <aspNetCore processPath="".\test.exe"" stdoutLogEnabled=""false"" stdoutLogFile="".\logs\stdout"" startupTimeLimit=""3600""/>
+    <aspNetCore processPath="".\test.exe"" stdoutLogEnabled=""false"" stdoutLogFile="".\logs\stdout"" />
   </system.webServer>
 </configuration>");
 
@@ -168,8 +168,8 @@ namespace Microsoft.AspNetCore.Server.IISIntegration.Tools.Tests
             aspNetCoreElement.Elements().Remove();
 
             Assert.True(XNode.DeepEquals(
-                XDocument.Parse(@"<aspNetCore processPath=""%home%\site\test.exe"" stdoutLogEnabled=""false""
-                    stdoutLogFile=""\\?\%home%\LogFiles\stdout"" startupTimeLimit=""3600""/>").Root,
+                XDocument.Parse(@"<aspNetCore processPath="".\test.exe"" stdoutLogEnabled=""false""
+                    stdoutLogFile=""\\?\%home%\LogFiles\stdout"" />").Root,
                 aspNetCoreElement));
         }
 
@@ -182,7 +182,7 @@ namespace Microsoft.AspNetCore.Server.IISIntegration.Tools.Tests
 
             Assert.True(XNode.DeepEquals(
                 XDocument.Parse(@"<aspNetCore processPath=""dotnet"" arguments="".\test.exe"" stdoutLogEnabled=""false""
-                     stdoutLogFile="".\logs\stdout"" startupTimeLimit=""3600""/>").Root,
+                     stdoutLogFile="".\logs\stdout"" />").Root,
                 aspNetCoreElement));
         }
 
@@ -198,7 +198,7 @@ namespace Microsoft.AspNetCore.Server.IISIntegration.Tools.Tests
 
             Assert.True(XNode.DeepEquals(
                 XDocument.Parse(@"<aspNetCore processPath=""dotnet"" arguments="".\test.exe"" stdoutLogEnabled=""false""
-                     stdoutLogFile="".\logs\stdout"" startupTimeLimit=""3600""/>").Root,
+                     stdoutLogFile="".\logs\stdout"" />").Root,
                 aspNetCoreElement));
         }